Configuration

Covid19_manual

{
  "entity types": [
    {
      "id": "Disease"
    },
    {
      "id": "PositiveRegulation"
    },
    {
      "id": "NegativeRegulation"
    },
    {
      "id": "Outbreak"
    },
    {
      "id": "Gene"
    },
    {
      "id": "Biological"
    },
    {
      "id": "Glycan"
    },
    {
      "id": "TrialDesign"
    },
    {
      "id": "Trial"
    },
    {
      "id": "Company"
    },
    {
      "id": "Condition"
    },
    {
      "id": "Type"
    },
    {
      "id": "Infection"
    },
    {
      "id": "Die"
    },
    {
      "id": "Structure"
    },
    {
      "id": "Cleave"
    },
    {
      "id": "Method"
    },
    {
      "id": "Therapy"
    },
    {
      "id": "Countermeasure"
    },
    {
      "id": "Dose"
    },
    {
      "id": "Dosage"
    },
    {
      "id": "Amount"
    },
    {
      "id": "Timing"
    },
    {
      "id": "Interval"
    },
    {
      "id": "Period"
    },
    {
      "id": "Duration"
    },
    {
      "id": "Status_of_Care"
    },
    {
      "id": "Index"
    },
    {
      "id": "Species"
    },
    {
      "id": "Percent"
    },
    {
      "id": "Ratio"
    },
    {
      "id": "Grade"
    },
    {
      "id": "Number"
    },
    {
      "id": "Year"
    },
    {
      "id": "Area"
    },
    {
      "id": "Age"
    },
    {
      "id": "Sex"
    },
    {
      "id": "Chemical",
      "default": true
    },
    {
      "id": "Variation"
    },
    {
      "id": "Without"
    },
    {
      "id": "High"
    },
    {
      "id": "Low"
    },
    {
      "id": "Inhibition"
    },
    {
      "id": "Anatomy"
    },
    {
      "id": "Environment"
    },
    {
      "id": "Localization"
    },
    {
      "id": "Unit"
    },
    {
      "id": "Phenomena"
    }
  ],
  "relation types": [
    {
      "id": "has_a"
    },
    {
      "id": "has_status"
    },
    {
      "id": "has_role"
    },
    {
      "id": "is_a"
    },
    {
      "id": "for"
    },
    {
      "id": "to"
    },
    {
      "id": "binds_to"
    },
    {
      "id": "-"
    },
    {
      "id": "cause_of"
    },
    {
      "id": "by"
    },
    {
      "id": "made_by"
    },
    {
      "id": "made_of"
    },
    {
      "id": "made_from"
    },
    {
      "id": "named"
    },
    {
      "id": "relates"
    },
    {
      "id": "via"
    },
    {
      "id": "in"
    },
    {
      "id": "on"
    },
    {
      "id": "at"
    },
    {
      "id": "into"
    },
    {
      "id": "with"
    },
    {
      "id": "as"
    },
    {
      "id": "from"
    },
    {
      "id": "against"
    },
    {
      "id": "using"
    },
    {
      "id": "during"
    },
    {
      "id": "abbreviation"
    },
    {
      "id": "synonym"
    },
    {
      "id": "coreference"
    },
    {
      "id": "associate_with"
    },
    {
      "id": "of_a",
      "default": true
    }
  ],
  "attribute types": [
    {
      "pred": "tao:has_database_id",
      "value type": "string",
      "default": "MESH:"
    },
    {
      "pred": "details",
      "value type": "selection",
      "values": [
        {
          "id": "synonym"
        },
        {
          "id": "abbreviation",
          "default": true
        }
      ]
    },
    {
      "pred": "Memo",
      "value type": "string",
      "default": ""
    },
    {
      "pred": "typo",
      "value type": "flag",
      "default": true,
      "label": "typo"
    },
    {
      "pred": "correct/standard/original word",
      "value type": "string",
      "default": ""
    },
    {
      "pred": "ForCovid19",
      "value type": "selection",
      "values": [
        {
          "id": "notCovid19"
        },
        {
          "id": "comorbidity"
        },
        {
          "id": "history"
        },
        {
          "id": "inclusion_criteria"
        },
        {
          "id": "exclusion_criteria"
        },
        {
          "id": "peptide"
        },
        {
          "id": "drug",
          "default": true
        }
      ]
    },
    {
      "pred": "all_replicate",
      "value type": "flag",
      "default": true,
      "label": "replicate"
    },
    {
      "pred": "tao:has_standard_notation",
      "value type": "string",
      "default": "p."
    },
    {
      "pred": "need further information",
      "value type": "flag",
      "default": true,
      "label": "need further information"
    }
  ]
}